Table 1 Statistics of the assembled genome of Indian oil sardine, Sardinella longiceps.
From: The sequence and de novo assembly of the genome of the Indian oil sardine, Sardinella longiceps
Genome assembly statistics | Data | |
|---|---|---|
Total length | 1,077,164,011 | |
Number of scaffolds | 10,318 | |
Longest scaffold | 43,849,268 | |
N50 scaffold length | 31,865,965 | |
GC rate (% of genome) | 43% | |
Repeat elements (% of genome) | 23.24% | |
BUSCO genome completeness score | Data | Ratio |
Complete BUSCOs | 3400 | 93.5% |
Complete and single copy BUSCOs (C) | 3147 | 86.5% |
Complete and duplicated BUSCOs (D) | 253 | 7.0% |
Fragmented BUSCOs (F) | 108 | 3.0% |
Missing BUSCOs | 132 | 3.5% |
Total number of Actinopterygii orthologs | 3640 |
