Table 1 Summary of sequencing data of Musa acuminata ssp. malaccensis for haplotype-resolved and telomere-to-telomere assembly and genome annotation.
Sequencing | Clean base (Gb) | Clean reads | N50 length (bp) | Depth (X) | Sample | Application |
|---|---|---|---|---|---|---|
HiFi | 32.39 | 1,793,624 | 17,320 | 64.78 | Leaf | Assembly |
HiC | 134.00 | 894,989,890 | 2 × 150 | 268 | Leaf | Chromosome construction |
ONT | 20.80 | 439,578 | 86,861 | 41.6 | Leaf | Gap filling |
Illumina | 15.58 | \ | 2 × 150 | 31.16 | Leaf | Genome evaluation |
RNA-seq | 6.6 | \ | 2 × 150 | \ | Flower | Genome annotation |
RNA-seq | 7.1 | \ | 2 × 150 | \ | Fruit | Genome annotation |
RNA-seq | 6.1 | \ | 2 × 150 | \ | Leaf | Genome annotation |
RNA-seq | 7.1 | \ | 2 × 150 | \ | Root | Genome annotation |