Table 2 Repeat sequence analysis of the genome of Fusarium proliferatum DSM106835.
From: Fully resolved assembly of Fusarium proliferatum DSM106835 genome
Type of Element | Number of Element | Length (bp) | Percentage of Sequence (%) |
|---|---|---|---|
Retroelements | 248 | 482,156 | 0.82 |
LINEs | 66 | 215,895 | 0.37 |
LTR elements | 182 | 266,261 | 0.46 |
Gypsy/DIRS1 | 46 | 222,508 | 0.38 |
DNA transposons | 339 | 391,106 | 0.67 |
Tc1-IS630-Pogo | 269 | 161,039 | 0.28 |
Rolling-circles | 3239 | 1,522,651 | 2.60 |
Unclassified | 1610 | 1,560,876 | 2.67 |
Small RNA | 2490 | 2,632,552 | 4.50 |
Simple repeats | 6204 | 248,208 | 0.42 |
Low complexity | 649 | 31,602 | 0.05 |
Total | 15342 | 7,734,854 | 13.23 |
