Table 6 Gene component analysis of the genomes of Zicaitai and seven other Cruciferae species, namely Brassica rapa (Brap), Brassica napus (Bnap), Brassica juncea (Bjun), Brassica nigra (Bnig), Brassica oleracea (Bole), Brassica carinata (Bcar), and Arabidopsis thaliana (Atha).
From: Chromosome-level genome assembly and annotation of Zicaitai (Brassica rapa var. purpuraria)
Species | Gene number | Average transcript length(bp) | Average CDS length(bp) | Average exons per gene | Average exon length(bp) | Average intron length(bp) |
|---|---|---|---|---|---|---|
Zicaitai | 42,051 | 2,001.16 | 1,101.46 | 4.82 | 228.29 | 235.23 |
Bjun | 100,829 | 2,023.83 | 1,161.33 | 4.84 | 239.88 | 224.54 |
Bnap | 96,553 | 2,021.74 | 1,201.60 | 4.86 | 247.46 | 212.70 |
Brap | 41,049 | 2,042.79 | 1,260.81 | 5.03 | 250.79 | 194.16 |
Bnig | 57,386 | 1,734.89 | 1,042.26 | 4.42 | 236.02 | 202.76 |
Bcar | 97,148 | 2,374.57 | 1,004.92 | 4.60 | 218.29 | 380.08 |
Bole | 43,923 | 2,033.70 | 1,195.25 | 4.87 | 245.40 | 216.62 |
Atha | 27,221 | 1,902.49 | 1,232.41 | 5.17 | 238.26 | 160.60 |
