Table 2 Genome annotation statistics.
Swietenia macrophylla | Khaya senegalensis | |
|---|---|---|
Number of protein-coding genes | 34,129 | 31,908 |
Percentage of functional annotation genes (%) | 97.44 | 98.49 |
BUSCOs completeness of annotation (%) | 93.40 | 92.20 |
Average gene length (bp) | 3052.92 | 3120.97 |
Average exon length (bp) | 215.60 | 229.99 |
Average exon number per gene | 5.58 | 5.36 |
Average intron length (bp) | 402.79 | 432.16 |
Number of miRNAs | 187 | 123 |
Number of tRNAs | 648 | 844 |
Number of rRNAs | 249 | 186 |
Percentage of repeat sequence (%) | 29.50 | 21.83 |
SINE (%) | 0.03 | 0.08 |
LINE (%) | 0.54 | 0.48 |
Copia (%) | 9.04 | 6.24 |
Gypsy (%) | 4.87 | 5.19 |
