Fig. 1
From: Haplotype-resolved chromosome-scale genomes of the Asian and African Savannah Elephants
Characteristics of the chromosome-scale genomes of the Asian (Elephas maximus) and African Savannah Elephant (Loxodonta africana). (a) Circos plot of genome assembly. A) Pseudo-chromosomes; B) gene density; C) GC content; D) repeat number; E) sequencing depth (~100 Gb DNBSEQ reads aligned to the genome); F) chromosome synteny (keep the longest 25,000). (b) Hi-C intra-chromosomal contact map of the L. africana haploid genome assembly. (c) Hi-C intra-chromosomal contact map of the E. maximus haploid genome assembly. Hi-C interactions within and among chromosomes were drawn based on the chromatin interaction frequencies between pairs of genomic regions.
