Table 2 Statistics of scRNA-seq dataset used in this study.
HER2 | |
|---|---|
Number of reads | 402,787,243 |
Estimated number of cells | 7,740 |
Median number of genes per cell | 1,088 |
Median number of UMI counts per cell | 1,665 |
Mean reads per cell | 52,040 |
Q30 bases in barcode | 97.30% |
Q30 bases in RNA read | 91.90% |
Q30 bases in UMI | 97.30% |
Reads mapped to genome | 93.00% |
Reads mapped confidently to genome | 58.00% |
Reads mapped confidently to exonic regions | 50.70% |
Reads mapped confidently to transcriptome | 49.30% |
