Table 4 Used reference databases for mapping of sRNA sequencing reads.
From: miR-Blood – a small RNA atlas of human blood components
sRNA classes | Database (Release); Reference |
|---|---|
miRNAs | miRBase database (Release 22)19; |
rRNAs, Y RNAs | precompiled data from NCBI provided by SPORTS (version 1.1)14; |
tRNAs | Genomic tRNA database (date: 25.05.2021)23; |
tRNAs | tRF-1 and tRNA-leader sequence data (date: 09.04.2019)12; |
piRNAs | piRNA cluster database (date: 25.05.2021)24; |
lncRNAs, sRNAs, snoRNAs | Ensembl (Release 104)25; |
snoRNAs | snoDB (version 2.0)26; |
