Table 2 Genome completeness estimated by BUSCO32 using the eudicots_odb10 ortholog dataset at different stages of the genome assembly process.
From: The draft genome of Spiraea crenata L. (Rosaceae) – the first complete genome in tribe Spiraeeae
BUSCO genes | nextDenovo | MaSuRCA | Merged (MaSuRCA + nextDenovo) | Merged pseudohaploid | Merged and reduced |
|---|---|---|---|---|---|
Complete (%) | 2,179 (93.68) | 2,175 (93.51) | 2,233 (96.00) | 2,233 (96.00) | 2,233 (96.00) |
Single copy (%) | 2,117 (91.01) | 2,049 (88.09) | 2,085 (86.94) | 2,085 (86.94) | 2,085 (86.94) |
Duplicated (%) | 162 (6.96) | 126 (5.42) | 148 (6.36) | 148 (6.36) | 148 (6.36) |
Fragmented (%) | 13 (0.56) | 19 (0.82) | 17 (0.73) | 17 (0.73) | 17 (0.73) |
Missing (%) | 34 (1.46) | 132 (5.67) | 76 (3.27) | 76 (3.27) | 76 (3.27) |
Total number of BUSCOs | 2,326 | 2,326 | 2,326 | 2,326 | 2,326 |
