Fig. 3
From: Chromosome-level genome assembly of the diploid oat species Avena longiglumis
Genomic features of Avena longiglumis PI657387. (a) Seven chromosomes (scale in 100 Mb) with pink, green and red regions denoting centromere, 5 S (ALO07) and 45 S (ALO01 and ALO07) rDNA positions. (b) Transposable element (TE) density. (c) Long-terminal repeat TE density. (d) Long interspersed nuclear element (LINE) density. (e) Helitron density (cyan). (f) Expanded gene locations. (g) Contracted gene locations. (h) Single copy orthologue gene locations. (i) High-confidence gene locations. (j) Purified selection gene (P-value ≤ 0.05) locations. (k) Gene expression profiling in ALO roots. (l) Gene expression profiling in ALO leaves. (m) Inter-chromosomal synteny. b, d–h & k–l: 100 bp bins; c: 1 Mb bins; i–j: 3 kb bins.
