Fig. 2
From: A gap-free genome assembly of Fusarium oxysporum f. sp. conglutinans, a vascular wilt pathogen
Comparison of two genome assemblies of Fusarium oxysporum strain Fo5176. (A) D-GENIES dotplot alignment comparing the chromosome features between the Fokkens assembly (19 chromosomes, horizontal) and the gap-free assembly (18 chromosomes, vertical). With numbered chromosomes as coordinates, Chr19 and Chr17 of the previous assembly are joint in Chr17 of the new assembly (the upper right). (B-C) The correct joining of previous Chr19 and Chr17 (horizontal) into new Chr17 (vertical) is confirmed by genome dotplot (B) and Hi-C contact map (C). (D) IGV visualization of PacBio HiFi reads spanning the genomic junction at Chr17 of the gap-free assembly. The dashed red boxes denote the Chr19 and Chr17 chromosome regions of Fokkens assembly, respectively, and the underneath (Fo5176_gapfree_Chr17) represents the Chr17 region from the gap-free assembly. Chr: chromosome. Ann: annotation.
