Table 5 Make Murcko scaffolds generic, where all atom types are transformed into carbon (C) and all bonds are considered as single bonds.

From: Quantum Chemistry Dataset with Ground- and Excited-state Properties of 450 Kilo Molecules

No.

Image

Murcko Scaffold Smiles

Number of Molecules

No.

Image

Murcko Scaffold Smiles

Number of Molecules

1

C1CCCC1

53327

11

CC1CCC1

4960

2

C1CCCCC1

33802

12

C1CCCCCC1

4902

3

C1CC1

31767

13

C1CCC2CC2C1

4001

4

CC1CCCC1

17570

14

C1CC2CC1C2

3524

5

C1CCC1

16435

15

C1CC2CCC2C1

3455

6

CC1CCCCC1

12189

16

[CH]1CCCCC1

2933

7

C1CC2CC2C1

8816

17

CC1CCCCCC1

2851

8

C1CC2CC12

5886

18

C1CC2CCC1C2

2778

9

C1CC2CCCC2C1

5139

19

[CH]1[CH]CCC1

2642

10

C1CCC2CCCC2C1

5110

20

C1CCC(C2CC2)C1

2413

  1. Top 20 generic Murcko scaffold SMILES in the QCDGE dataset, along with their corresponding images and quantities.