Table 2 Analytical summary of three published whole genome sequencing of Zizania latifolia.
Accessions | Cultivated Zizania latifolia (TL) | Wild Zizania latifolia (Huai’an) | Wild Zizania latifolia (HSD) |
|---|---|---|---|
Sequencing technology | PacBio HiFi, Hi-C, MGI short reads | ONT, Hi-C, Illumina short reads | Illumina short reads |
Assembly level | Chromosome-level, near complete | Chromsome-level | draft, scaffold |
Genome size | 578.42 Mb | 547.36 Mb | 604.1 Mb |
Contig N50 | 33.75 Mb | 4.48 Mb | — |
Scaffold number | 37 | 164 | 4542 |
Scaffold N50 | 34.71 Mb | 32.79 Mb | 0.60 Mb |
BUSCO | 1588 (98.39%) | 1577 (97.71%) | — |
Reference | Zhao et al.62 | Yan et al.12 | Guo et al.13 |
