Table 3 Repetitive elements of the Lethrinus nebulosus reference genome (fLetNeb1.1) haplotype 1 assembly.
From: Chromosome-level genome assembly of the spangled emperor, Lethrinus nebulosus (Forsskål 1775)
Number of elements | Length (bp) | Percentage in genome (%) | |
|---|---|---|---|
Short interspersed nuclear elements (SINEs) | 38,508 | 5,487,653 | 0.48 |
Long interspersed nuclear elements (LINEs) | 134,447 | 37,170,753 | 3.28 |
Long terminal repeats (LTRs) | 44,005 | 9,666,075 | 0.85 |
DNA transposon | 770,686 | 144,634,861 | 12.76 |
Rolling circles | 20,005 | 10,498,883 | 0.93 |
Unclassified | 1,469,066 | 216,065,075 | 19.07 |
Small RNA | 35,041 | 6,665,110 | 0.59 |
Satellites | 15,617 | 2,746,411 | 0.24 |
Simple repeats | 438,101 | 20,092,114 | 1.77 |
Low complexity | 52,272 | 3,102,515 | 0.27 |
