Table 1 Statistics of the sequencing data.
From: Chromosome-level genome assembly of a critically endangered species Leuciscus chuanchicus
Library type | Tissue | Insert size (bp) | Reads number | Total read bases (Gb) | Mean read length (bp) | N50 read length (bp) | Average coverage (X) |
|---|---|---|---|---|---|---|---|
PacBio HiFi | Muscle | 20,000 | 4,764,355 | 77.24 | 16212.62 | 16,299 | 69.86 |
Hi-C | Muscle | 350 | 962,506,070 | 144.38 | 150 | 150 | 130.58 |
Illumina | Muscle | 350 | 385,955,792 | 57.89 | 150 | 150 | 52.36 |
RNA-seq | Pooled | 350 | 122,898,236 | 18.43 | 150 | 150 | — |
