Table 1 Summary of sequencing libraries and data statistics used for the assembly, scaffolding, and annotation of the C. grayii genome.
From: A chromosome-level genome assembly of Gray’s grenadier anchovy, Coilia grayii
Library types | Sample | Bases (Gb) | Reads Count | Mean length (bp) | N50 (bp) | Depth (X)* |
|---|---|---|---|---|---|---|
Short-read | Muscle | 50.38 | 335,891,428 | 150 | 150 | 44.58 |
CCS long reads | Muscle | 41.41 | 2,173,508 | 38,121 | 37,986 | 36.64 |
Hi-C | Muscle | 90.83 | 302,784,377 | 150 | 150 | 80.38 |
RNA-seq | Mix | 15.76 | 52,533,084 | 150 | 150 | / |