Table 3 Genome annotation of A. turgidum and P. alpinum.
Annotation | A. turgidum | P. alpinum |
|---|---|---|
Number of predicted protein-coding genes | 25,999 | 28,070 |
Average gene length (bp) | 3,017.35 | 3,074.81 |
Average exon length (bp) | 315.22 | 249.23 |
Average exon number per gene | 6.46 | 4.58 |
Average intron length (bp) | 179.36 | 519.72 |
Averrage intron number per gene | 5.46 | 3.58 |
Average CDS length (bp) | 223.00 | 249.25 |
Average CDS number per gene | 6.15 | 4.63 |
Percentage of repeat sequence (%) | 42.65 | 53.37 |
LTR (%) | 15.45 | 25.16 |
LINE (%) | 4.66 | 8.54 |
SINE (%) | 0.18 | 0.44 |
DNA transposons (%) | 20.91 | 10.72 |