Table 4 The information on the kit for library preparation kit and insert size for genome and transcriptome sequencing by short-read sequencers.
From: The draft genome sequences of the cosmopolitan centric diatom, the genus Skeletonema
No. | species | strain | DNA (short_reads) | RNA (short_reads) | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
company | sequencers | Library kit | insert size | company | sequencers | Library kit | insert size | |||
1 | Skeletonema ardens | NIES-2837 | Macrogen | Novaseq. 6000 | TruSeq DNA PCR Free | 350 | BGI | DNBSEQ-G400 | BGI kit | 200-400 |
2 | S. costatum | SC_Ari12 | Macrogen | Novaseq. 6000 | TruSeq DNA PCR Free | 350 | BGI | DNBSEQ-G400 | BGI kit | 200-400 |
3 | S. costatum | SCHP35 | BGI | DNBSEQ-G400 | BGI kit | 300-400 | — | — | — | |
4 | S. dohrnii | SD_Ari07 | Macrogen | Novaseq. 6000 | TruSeq DNA PCR Free | 350 | BGI | DNBSEQ-G400 | BGI kit | 200-400 |
5 | S. dohrnii | SD_MZ01 | BGI | DNBSEQ-G400 | BGI kit | 300-400 | BGI | DNBSEQ-G400 | BGI kit | 200-400 |
6 | S. grevillei | NIES-2840 | Macrogen | Novaseq. 6000 | TruSeq DNA PCR Free | 350 | BGI | DNBSEQ-G400 | BGI kit | 200-400 |
7 | S. japonicum | SJ_T01 | BGI | DNBSEQ-G400 | BGI kit | 300-400 | BGI | DNBSEQ-G400 | BGI kit | 200-400 |
8 | S. menzelii | NIES-2842 | Macrogen | Novaseq. 6000 | TruSeq DNA PCR Free | 350 | BGI | DNBSEQ-G400 | BGI kit | 200-400 |
9 | S. pseudocostatum | NIES-2843 | Macrogen | Novaseq. 6000 | TruSeq DNA PCR Free | 350 | BGI | DNBSEQ-G400 | BGI kit | 200-400 |
10 | S. subsalsum | SS_0375 | BGI | DNBSEQ-G400 | BGI kit | 300-400 | BGI | DNBSEQ-G400 | BGI kit | 200-400 |
11 | S. tropicum | ST_Kao | BGI | DNBSEQ-G400 | BGI kit | 300-400 | BGI | DNBSEQ-G400 | BGI kit | 200-400 |
