Table 1 Statistics of the C. fascicularis genome assembly.
From: High quality chromosome level genome assembly of Camellia fascicularis, an endangered plant in China
Parameter | Genome | Haplotype A | Haplotype B |
|---|---|---|---|
Total assembly size (bp) | 5,649,390,545 | 2,889,473,062 | 2,759,917,483 |
GC content (%) | 38.47 | 38.52 | 38.43 |
Total number of contigs | 180 | 134 | 46 |
Maximum contig length (bp) | 206,673,088 | 185,311,321 | 206,673,088 |
Minimum contig length (bp) | 50,287 bp | 50,287 | 488,404 |
Contig N50 (bp) | 115,507,734 | 196,036,475 | 104,266,605 |
Contig N90 (bp) | 46,931,756 | 42,938,836 | 47,576,342 |
Total number of scaffolds | 123 | 108 | 15 |
Maximum scaffold length (bp) | 235,545,841 | 235,545,841 | 228,604,709 |
Minimum scaffold length (bp) | 50,287 | 50,287 | 119,538,453 |
Scaffold N50 (bp) | 191,079,998 | 196,036,475 | 186,901,817 |
Scaffold N90 (bp) | 156,240,872 | 163,838,044 | 156,240,872 |
Gap number | 57 | 26 | 31 |
