Table 4 Functional annotation of protein coding genes in C. fascicularis.
From: High quality chromosome level genome assembly of Camellia fascicularis, an endangered plant in China
Program | Database | Gene number | Percent |
|---|---|---|---|
eggNOG-mapper | GO | 35,890 | 42.07% |
KEGG_Pathway | 21,468 | 25.16% | |
KEGG_KO | 35,165 | 41.22% | |
eggNOG | 72,677 | 85.19% | |
COG | 77,492 | 90.83% | |
DIAMOND | Swiss_Prot | 56,489 | 66.21% |
TrEMBL | 82,708 | 96.94% | |
NR | 77,659 | 91.03% | |
A. thaliana | 67,211 | 78.78% | |
InterProScan | Pfam | 63,198 | 74.08% |
CDD | 23,639 | 27.71% | |
PRINTS | 10,705 | 12.55% | |
Interpro | 67,563 | 79.19% | |
Phobius | 27,481 | 32.21% | |
Gene3D | 53,698 | 62.94% | |
SUPERFAMILY | 50,434 | 59.11% | |
TIGRFAM | 6,792 | 7.96% | |
Coils | 11,530 | 13.51% | |
SMART | 22,977 | 26.93% | |
Unannotated in total | 1,590 | 1.86% | |
