Table 2 The detailed QC matrices of the spatial transcriptomics FASTQ files for the eight samples.
From: A spatial transcriptomics dataset of the endometrium from repeated implantation failure patients
Sample | Number of Reads | Sequencing Saturation (%) | Q30 Bases in Barcode (%) | Q30 Bases in RNA Read (%) | Q30 Bases in UMI (%) |
|---|---|---|---|---|---|
CTR1 | 333,340,739 | 93.74 | 95.42 | 90.76 | 91.37 |
CTR1 | 301,378,472 | 93.68 | 95.79 | 91.08 | 91.57 |
CTR1 | 298,816,693 | 90.09 | 95.69 | 91.61 | 91.65 |
CTR1 | 334,052,677 | 91.54 | 95.63 | 92.03 | 91.4 |
RIF1 | 284,189,121 | 96.15 | 96.39 | 93.34 | 92.51 |
RIF2 | 337,594,141 | 94.95 | 95.35 | 90.63 | 91.26 |
RIF3 | 298,121,637 | 97.26 | 96.39 | 93.28 | 93.08 |
RIF4 | 279,198,231 | 95.15 | 95.54 | 90.74 | 91.69 |
