Table 2 Kits and reagents for library preparation.
From: Hi-C sequencing data from frontal cortex of laboratory rats
Kit/Reagent | Supplier | Part No. | Notes |
|---|---|---|---|
Arima Hi-C + Kit | Arima | A410321 | Component Box A |
A410322 | Component Box B | ||
A410239 | Component Box C | ||
Kapa Hyper Prep Kit | Roche | KK8504 | |
Ampure XP Beads | Beckman Coulter | A63880 | |
Qubit HS DNA Assay | Invitrogen (Thermo) | Q32854 | |
Covaris microTUBE | Covaris | 520045 | Full name: Covaris microTUBE AFA Fiber Pre-Slit Snap-Cap 6 x 16 mm |
Illumina TruSeq Adapters | Illumina | 20015960 | Full name: Illumina TruSeq DNA Single Indexes Set A; NOW DEFUNCT |
Illumina TruSeq UDI v2 | Illumina | 20040870 | Replacement for above; used in only most recent Hi-C library (E1AF) |
Kapa Library Quant Kit | Roche | KK4824 | Full name: KAPA Library Quantification Kit (Illumina) Lightcycler 480qPCR Mix |
