Table 6 Summary of RNAseq sequencing data of H. nipponensis genome.
From: A telomere-to-telomere reference genome assembly of the Hypomesus nipponensis
Sample | Raw reads | Raw bases (bp) | Clean reads | Clean bases (bp) | Clean reads Q20 (%) | HNIP-T2T unique mapping rate (%) | HNIP-V2 unique mapping rate (%) |
|---|---|---|---|---|---|---|---|
SF01C | 43,780,490 | 6,567,073,500 | 42,525,218 | 6,378,782,700 | 97.49 | 90.66 | 90.11 |
SF01D | 44,380,700 | 6,657,105,000 | 42,996,368 | 6,449,455,200 | 97.42 | 90.52 | 89.95 |
SF01E | 43,542,798 | 6,531,419,700 | 42,102,588 | 6,315,388,200 | 97.80 | 90.67 | 90.15 |
SF01F | 46,188,238 | 6,928,235,700 | 44,386,920 | 6,658,038,000 | 97.88 | 91.17 | 90.57 |
SF01G | 52,906,478 | 7,935,971,700 | 51,481,516 | 7,722,227,400 | 97.83 | 90.94 | 90.36 |
