Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

Advertisement

Scientific Data
  • View all journals
  • Search
  • My Account Login
  • Content Explore content
  • About the journal
  • Publish with us
  • Sign up for alerts
  • RSS feed
  1. nature
  2. scientific data
  3. data descriptors
  4. article
Chromosomal-level genome assembly of minute pirate bug Orius nagaii Yasunaga, 1993 (Hemiptera: Anthocoridae)
Download PDF
Download PDF
  • Data Descriptor
  • Open access
  • Published: 21 May 2026

Chromosomal-level genome assembly of minute pirate bug Orius nagaii Yasunaga, 1993 (Hemiptera: Anthocoridae)

  • Zhenjuan Yin1,2,3,4,
  • Chengxing Wang3,4,
  • Dingyin Li1,2,
  • Ruijuan Wang3,4,
  • Xiaoyan Dai3,4,
  • Li Zheng3,4 &
  • …
  • Junrui Zhi1,2 

Scientific Data (2026) Cite this article

We are providing an unedited version of this manuscript to give early access to its findings. Before final publication, the manuscript will undergo further editing. Please note there may be errors present which affect the content, and all legal disclaimers apply.

Subjects

  • Genome
  • Genomics

Abstract

Species of the genus Orius, diminutive predatory insects that act as natural enemies of other arthropods, are frequently employed in agricultural pest management for controlling various pests, such as thrips, mites, aphids, whiteflies, etc. However, the scarcity of high-quality genomic resources for these predators hinders our comprehension of their population evolution and predation ecology. Consequently, we assembled and annotated a chromosomal-scale genome of Orius nagaii by collating PacBio and Illumina sequencing and Hi-C genomic analysis techniques. The final genome assembly size 152.62 Mb, with scaffold and contig N50 lengths of 11.53 and 2.39 Mb, respectively. It is organized into 12 pairs of autosomes and a pair of XY sex chromosomes. The quality assessment of the genomic data with BUSCO revealed a completeness of 98.5% (n = 1,367). Also, 11,917 protein-coding genes were discovered, with 94.28% of them having functional annotations. The high-quality genome of O. nagaii produced serves as a valuable resource for comprehending the interactions between predatory natural enemies and hosts, along with their evolutionary trajectories.

Similar content being viewed by others

Chromosome-level genome assembly of the predatory flower bug Orius strigicollis

Article Open access 20 May 2025

Chromosome-level genome assembly of Phytoseiulus persimilis Athias-Henriot

Article Open access 18 February 2025

Chromosome-level genome assembly of the two-spotted spider mite Tetranychus urticae

Article Open access 18 July 2024

Acknowledgements

This work was supported by the National Key R&D Program of China (2023YFD1400600), Taishan Scholars Program of Shandong Province (tsqn202312293), Shandong Provincial Agriculture Research System (SDAIT-24), China Postdoctoral Science Foundation (2025M783815), Postdoctoral Innovation Program of Shandong Province (SDCX-ZG-202503134) and Agricultural Science and Technology Innovation Project of Shandong Academy of Agricultural Sciences (CXGC2025B01).

Author information

Authors and Affiliations

  1. Institute of Entomology, College of Guizhou University, Guiyang, 550025, China

    Zhenjuan Yin, Dingyin Li & Junrui Zhi

  2. Guizhou Provincial Key Laboratory for Agricultural Pest Management of the Mountainous Region, Guiyang, 550025, China

    Zhenjuan Yin, Dingyin Li & Junrui Zhi

  3. Institute of Plant Protection, Shandong Academy of Agricultural Sciences, Jinan, 250100, China

    Zhenjuan Yin, Chengxing Wang, Ruijuan Wang, Xiaoyan Dai & Li Zheng

  4. Key Laboratory of Natural Enemies Insects, Ministry of Agriculture and Rural Affairs, Jinan, 250100, China

    Zhenjuan Yin, Chengxing Wang, Ruijuan Wang, Xiaoyan Dai & Li Zheng

Authors
  1. Zhenjuan Yin
    View author publications

    Search author on:PubMed Google Scholar

  2. Chengxing Wang
    View author publications

    Search author on:PubMed Google Scholar

  3. Dingyin Li
    View author publications

    Search author on:PubMed Google Scholar

  4. Ruijuan Wang
    View author publications

    Search author on:PubMed Google Scholar

  5. Xiaoyan Dai
    View author publications

    Search author on:PubMed Google Scholar

  6. Li Zheng
    View author publications

    Search author on:PubMed Google Scholar

  7. Junrui Zhi
    View author publications

    Search author on:PubMed Google Scholar

Corresponding authors

Correspondence to Zhenjuan Yin, Li Zheng or Junrui Zhi.

Ethics declarations

Competing interests

The authors declare no competing interests.

Additional information

Publisher’s note Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Rights and permissions

Open Access This article is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License, which permits any non-commercial use, sharing, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if you modified the licensed material. You do not have permission under this licence to share adapted material derived from this article or parts of it. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by-nc-nd/4.0/.

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Yin, Z., Wang, C., Li, D. et al. Chromosomal-level genome assembly of minute pirate bug Orius nagaii Yasunaga, 1993 (Hemiptera: Anthocoridae). Sci Data (2026). https://doi.org/10.1038/s41597-026-07372-3

Download citation

  • Received: 23 June 2025

  • Accepted: 28 April 2026

  • Published: 21 May 2026

  • DOI: https://doi.org/10.1038/s41597-026-07372-3

Share this article

Anyone you share the following link with will be able to read this content:

Sorry, a shareable link is not currently available for this article.

Provided by the Springer Nature SharedIt content-sharing initiative

Download PDF

Advertisement

Explore content

  • Research articles
  • News & Comment
  • Collections
  • Follow us on X
  • Sign up for alerts
  • RSS feed

About the journal

  • Aims and scope
  • Editors & Editorial Board
  • Journal Metrics
  • Policies
  • Open Access Fees and Funding
  • Calls for Papers
  • Contact

Publish with us

  • Submission Guidelines
  • Language editing services
  • Open access funding
  • Submit manuscript

Search

Advanced search

Quick links

  • Explore articles by subject
  • Find a job
  • Guide to authors
  • Editorial policies

Scientific Data (Sci Data)

ISSN 2052-4463 (online)

nature.com footer links

About Nature Portfolio

  • About us
  • Press releases
  • Press office
  • Contact us

Discover content

  • Journals A-Z
  • Articles by subject
  • protocols.io
  • Nature Index

Publishing policies

  • Nature portfolio policies
  • Open access

Author & Researcher services

  • Reprints & permissions
  • Research data
  • Language editing
  • Scientific editing
  • Nature Masterclasses
  • Research Solutions

Libraries & institutions

  • Librarian service & tools
  • Librarian portal
  • Open research
  • Recommend to library

Advertising & partnerships

  • Advertising
  • Partnerships & Services
  • Media kits
  • Branded content

Professional development

  • Nature Awards
  • Nature Careers
  • Nature Conferences

Regional websites

  • Nature Africa
  • Nature China
  • Nature India
  • Nature Japan
  • Nature Middle East
  • Privacy Policy
  • Use of cookies
  • Legal notice
  • Accessibility statement
  • Terms & Conditions
  • Your US state privacy rights
Springer Nature

© 2026 Springer Nature Limited

Nature Briefing: Translational Research

Sign up for the Nature Briefing: Translational Research newsletter — top stories in biotechnology, drug discovery and pharma.

Get what matters in translational research, free to your inbox weekly. Sign up for Nature Briefing: Translational Research