Table 4 Association information on ILP marker-traits related to salt stress.

Markers	Gene name	Gene ID	Sequence Description	Salt stress traits
Markers	Gene name	Gene ID	Sequence Description	RCC	RPH	RRDM	RSDM	RSOD	RPOD	RCAT	RMDA	RGR	RGP
EPIC50	C1	Gorai.005G026700	Leucine-rich repeat protein kinase family protein			MC^, AM^	MC^, AM^
EPIC66	C2	Gorai.007G047200	Leucine-rich repeat protein kinase family protein			AM^*
EPIC274	C3	Gorai.006G261800	Transducin/WD40 repeat-like superfamily protein								MC^, AM^
EPIC356	C4	Gorai.012G051500	WRKY DNA-binding protein 3					MC^*				MC^, AM^	MC^, AM^
EPIC531	C5	Gorai.009G418100	Plasma membrane intrinsic protein 2	MC^, AM^	MC^**	MC^*		AM^*	MC^*, AM^		MC^, AM^
EPIC309	C6	Gorai.010G020600	Transducin/WD40 repeat-like superfamily protein	MC^*, AM^	AM^*				MC^*
EPIC211	C7	Gorai.011G060100	Cytochrome P450 superfamily protein		MC^, AM^
EPIC477	C8	Gorai.008G210800	Zinc finger (C3HC4-type RING finger) family protein	MC^*, AM^	MC^*, AM^		MC^**		MC^**	AM^*
EPIC109	C9	Gorai.003G139900	Mitogen-activated protein kinase 3	MC^*					MC^*, AM^		MC^*, AM^

¹MC and AM means marker- trait associations detected in multiple comparisons and association mapping analysis, respectively.
²* and **: significant difference P < 0.05 and P < 0.01, respectively.
³Abbreviation for 10 traits related to salt tolerance is relative chlorophyll content (RCC), relative plant height (RPH), relative root dry matter (RRDM), relative shoot dry matter (RSDM), relative SOD activity (RSOD), relative POD activity (RPOD), relative CAT activity (RCAT) and relative MDA content (RMDA), relative germination rate (RGR), relative germination percentage (RGP), respectively.

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