Table 2 Regulatory genes are commonly high in GU wobble content, while genes involved in immune evasion are low in GU wobble content.
From: Frequent GU wobble pairings reduce translation efficiency in Plasmodium falciparum
GO ID | GO Term | Fold enrichment | Odds ratio | P-value |
|---|---|---|---|---|
a. | ||||
GO:2001141 | regulation of RNA biosynthetic process | 4.93 | 5.48 | 2.47E-11 |
GO:0006355 | regulation of transcription, DNA-templated | 4.93 | 5.48 | 2.47E-11 |
GO:0051252 | regulation of RNA metabolic process | 4.8 | 5.33 | 4.23E-11 |
GO:2000112 | regulation of cellular macromolecule biosynthetic process | 4.29 | 4.79 | 1.01E-10 |
GO:0010556 | regulation of macromolecule biosynthetic process | 4.29 | 4.79 | 1.01E-10 |
GO:0019219 | regulation of nucleobase-containing compound metabolic process | 4.26 | 4.75 | 1.18E-10 |
GO:0051171 | regulation of nitrogen compound metabolic process | 4.26 | 4.75 | 1.18E-10 |
GO:0009889 | regulation of biosynthetic process | 4.26 | 4.75 | 1.18E-10 |
GO:0031326 | regulation of cellular biosynthetic process | 4.26 | 4.75 | 1.18E-10 |
GO:0010468 | regulation of gene expression | 4.06 | 4.52 | 3.38E-10 |
b. | ||||
GO:0020033 | antigenic variation | 8.33 | 12.64 | 1.55E-62 |
GO:0051809 | passive evasion of immune response of other organism involved in symbiotic interaction | 8.33 | 12.64 | 1.55E-62 |
GO:0051832 | avoidance of defenses of other organism involved in symbiotic interaction | 8.25 | 12.51 | 3.44E-62 |
GO:0051834 | evasion or tolerance of defenses of other organism involved in symbiotic interaction | 8.25 | 12.51 | 3.44E-62 |
GO:0051805 | evasion or tolerance of immune response of other organism involved in symbiotic interaction | 8.25 | 12.51 | 3.44E-62 |
GO:0051707 | response to other organism | 8.25 | 12.51 | 3.44E-62 |
GO:0043207 | response to external biotic stimulus | 8.25 | 12.51 | 3.44E-62 |
GO:0052173 | response to defenses of other organism involved in symbiotic interaction | 8.25 | 12.51 | 3.44E-62 |
GO:0051807 | evasion or tolerance of defense response of other organism involved in symbiotic interaction | 8.25 | 12.51 | 3.44E-62 |
GO:0052564 | response to immune response of other organism involved in symbiotic interaction | 8.25 | 12.51 | 3.44E-62 |
