Table 2 SV rankings of the top-ten mutational hotspots in six groups.

From: Comparative analysis of Dendrobium plastomes and utility of plastomic mutational hotspots

 

Group A (2 species)

Group B (5 species)

Group C (10 species)

Group D (15 species)

Group E (20 species)

Group F (25 species)

psbB-psbT

1

1

1

1

1

1

ndhF-rpl32

—

3

3

2

2

2

trnT-trnL

3

2

2

3

3

3

rpl32-trnL

—

—

6

4

4

4

clpP-psbB

—

—

—

6

5

5

trnL intron

4

4

4

5

6

6

rpl16-rps3

—

—

5

7

7

7

trnE-trnT

9

—

7

9

8

8

trnR-atpA

6

—

—

—

9

9

rps16-trnQ

7

9

9

10

10

10

  1. “—” Means this locus ranked outside of the top-ten mutational hotspots.
  2. Group A: D. primulinum, D. gratiosissimum.
  3. Group B: D. primulinum, D. gratiosissimum, D. hercoglossum, D. falconeri, D. wardianum.
  4. Group C: D. primulinum, D. gratiosissimum, D. hercoglossum, D. falconeri, D. wardianum, D. aphyllum, D. devonianum, D. brymerianum, D. denneanum, D. wilsonii.
  5. Group D: D. primulinum, D. gratiosissimum, D. hercoglossum, D. falconeri, D. wardianum, D. aphyllum, D. devonianum, D. brymerianum, D. denneanum, D. wilsonii D. spatella, D. crepidatum, D. salaccense, D. ellipsophyllum, D. fanjingshanense.
  6. Group E: D. primulinum, D. gratiosissimum, D. hercoglossum, D. falconeri, D. wardianum, D. aphyllum, D. devonianum, D. brymerianum, D. denneanum, D. wilsonii D. spatella, D. crepidatum, D. salaccense, D. ellipsophyllum, D. fanjingshanense, D. chrysotoxum, D. parciflorum, D. exile, D. lohohense, D. fimbriatum.
  7. Group F: D. primulinum, D. gratiosissimum, D. hercoglossum, D. falconeri, D. wardianum, D. aphyllum, D. devonianum, D. brymerianum, D. denneanum, D. wilsonii D. spatella, D. crepidatum, D. salaccense, D. ellipsophyllum, D. fanjingshanense, D. chrysotoxum, D. parciflorum, D. exile, D. lohohense, D. fimbriatum, D. chrysanthum, D. henryi, D. xichouense, D. jenkinsii, D. parishii.
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