Table 2 List of DEGs related to signal transduction during graft healing process.

From: Transcriptome changes between compatible and incompatible graft combination of Litchi chinensis by digital gene expression profile

Gene ID

Compatibility (RPKM)

Incompatibility (RPKM)

Annotation

2 h

14 d

21 d

2 h

14 d

21 d

Response to wound

Litchi_GLEAN_10052959

3019.83

462.24

313.63

972.76

466.99

256.59

senescence-associated protein [Vitis quinquangularis]

Litchi_GLEAN_10048341

1159.89

147.86

244.78

68.08

131.61

185.93

mitogen-activated protein kinase [Citrus sinensis]

Litchi_GLEAN_10016027

725.94

550.77

559.42

498.68

635.45

454.27

CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]

Litchi_GLEAN_10065008

513.59

254.83

248.32

445.90

283.99

283.29

DNA binding protein, putative [Ricinus communis]

Litchi_GLEAN_10033568

393.4

50.85

80.68

68.15

48.87

81.29

gchitinase, putative [Ricinus communis]

Litchi_GLEAN_10003315

361.29

48.00

38.91

348.34

83.39

36.71

iaa-amino acid hydrolase 11 [Populus trichocarpa]

Litchi_GLEAN_10021109

283.42

54.08

62.50

18.21

47.67

32.64

CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]

Litchi_GLEAN_10027663

262.14

169.84

196.50

182.59

120.86

175.14

probable CCR4-associated factor 1 homolog 9-like [Vitis vinifera]

Litchi_GLEAN_10027663

262.14

169.84

196.50

182.59

120.86

175.14

CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]

Litchi_GLEAN_10063684

213.37

10.53

13.39

43.39

9.41

7.59

1,2-diacylglycerol 3-beta-galactosyltransferase, putative [Ricinus communis]

Litchi_GLEAN_10008363

153.28

13.98

27.91

6.14

23.85

28.35

12-oxophytodienoate reductase 3-like [Glycine max]

Litchi_GLEAN_10019124

141.9

116.46

119.18

62.17

98.74

94.07

receptor protein kinase, putative [Ricinus communis]

CaM

Litchi_GLEAN_10049763

120.57

16.92

30.48

7.61

15.50

20.02

calcium-dependent protein kinase, putative [Ricinus communis]

Litchi_GLEAN_10061686

111.23

61.68

70.65

69.94

59.01

63.20

calcium-dependent protein kinase, putative [Ricinus communis]

Litchi_GLEAN_10030665

97.29

25.69

21.91

25.59

26.71

24.87

calmodulin-binding protein [Populus euphratica]

Litchi_GLEAN_10034079

92.61

82.50

82.48

76.04

85.04

75.51

calcium-dependent protein kinase [Gossypium hirsutum]

Litchi_GLEAN_10015725

58.94

15.07

20.14

21.46

18.12

20.21

calcium-dependent protein kinase [Dimocarpus longan]

Litchi_GLEAN_10007743

38.48

30.57

58.89

25.38

28.24

43.27

calmodulin-binding transcription activator 2-like [Cucumis sativus]

Litchi_GLEAN_10032706

30.35

14.01

17.58

20.41

17.66

19.79

calcium-dependent protein kinase, putative [Ricinus communis]

Litchi_GLEAN_10063533

21.85

14.20

14.21

16.62

15.04

16.48

calcium dependent protein kinase 14 [Populus trichocarpa]

Litchi_GLEAN_10019427

10.82

8.95

18.44

5.89

9.41

13.35

calcium-transporting ATPase 12, plasma membrane-type-like [Vitis vinifera]

MAPK

Litchi_GLEAN_10048341

1159.89

147.86

244.78

68.08

131.61

185.93

mitogen-activated protein kinase [Citrus sinensis]

Litchi_GLEAN_10048356

518.64

55.97

69.86

41.64

48.23

54.92

big map kinase/bmk, putative [Ricinus communis]

Litchi_GLEAN_10039455

134.69

61.37

58.65

65.38

59.81

72.16

big map kinase/bmk, putative [Ricinus communis]

Litchi_GLEAN_10030350

93.71

43.64

47.47

41.79

40.98

46.98

Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis]

Litchi_GLEAN_10045161

59.61

4.92

8.19

58.27

5.75

10.45

kinase, putative [Ricinus communis]

Litchi_GLEAN_10055953

40.63

35.87

45.82

32.16

36.68

42.48

mitogen-activated protein kinase 9-like [Vitis vinifera]

Litchi_GLEAN_10058235

39.07

13.87

15.43

17.16

11.06

10.34

mitogen-activated protein kinase MAPK [Prunus armeniaca]

Litchi_GLEAN_10031819

24.43

6.79

7.48

5.01

6.20

5.30

kinase, putative [Ricinus communis]

Litchi_GLEAN_10028531

15.73

12.23

14.42

13.16

12.88

13.90

map3k delta-1 protein kinase, putative [Ricinus communis]

Litchi_GLEAN_10058386

12.61

2.41

5.29

5.97

3.11

4.12

kinase, putative [Ricinus communis]

Litchi_GLEAN_10047600

12.34

1.10

0.94

2.79

1.87

1.27

Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis]