Table 1 Each row of the table corresponds to DOM motifs associated with a patient match count ranging 30 and 35.

From: A Haystack Heuristic for Autoimmune Disease Biomarker Discovery Using Next-Gen Immune Repertoire Sequencing Data

Patient Match Count

#Unique Motifs

Motif with Maximum Hit Count

Maximum Hit Count

35

6

(TNE, 14), (DTA, 6), (CAR,0)

104

34

55

(TNE, 14), (VYYCAR, 3)

93

33

1

(SKN, 21), (YLT, 16), (PES, 10)

62

32

6

(YLTN, 16), (DTA, 6), (CAR, 0)

87

31

37

(YLTN, 16), (VYYCAR, 3)

79

30

66

(RDN, 24), (YLTN, 16), (CAR, 0)

74

  1. The patient match counts are listed in the first column. The second column contains the number of DOM motifs associated with each match count. The third column contains the DOM motif that matches the maximum number of sequences for a particular match count. The number of sequences matched by the third-column column motif is listed in the final column of the table. All motifs are stated in a parenthesis notation where (S, x) represents an non-gapped subsequence S that is located x amino acids to the left of the CDR3. The Prime Motif appears in row 1, column 3 of the table.
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