Table 3 Examples of gene-gene associations identified in KB with semantic similarity equal to 1.0.
From: DES-TOMATO: A Knowledge Exploration System Focused On Tomato Species
Gene Symbol/Description | Gene Symbol/Description | Common Annotations |
|---|---|---|
SERK3A/ID: 100736467 somatic embryogenesis receptor kinase 3 A [Solanum lycopersicum (tomato)] | LOC101259548/ID: 101259548 leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 [Solanum lycopersicum (tomato)] | “protein kinase activity”;“molecular_function”;“GO:0004672” “protein binding”;“molecular_function”;“GO:0005515” “ATP binding”;“molecular_function”;“GO:0005524” “protein phosphorylation”;“biological_process”;“GO:0006468” |
PHYF ID: 101259349 phytochrome F [Solanum lycopersicum (tomato)] | PHYB1 ID: 101262847 phytochrome B1 [Solanum lycopersicum (tomato)] | genes are involved in photoreceptor activity (GO:0009881) |
APX2 ID: 778224 cytosolic ascorbate peroxidase 2 [Solanum lycopersicum (tomato)] | LOC101264261 ID: 101264261 L-ascorbate peroxidase 3, peroxisomal [Solanum lycopersicum (tomato)] | “peroxidase activity”;“molecular_function”;“GO:0004601” “peroxidase activity”;“molecular_function”;“GO:0004601” “response to oxidative stress”;“biological_process”;“GO:0006979” “heme binding”;“molecular_function”;“GO:0020037” “oxidation-reduction process”;“biological_process”;“GO:0055114” |
