Table 3 Pathways enriched in the transcriptome of peritoneal effluent cells obtained from PET tests in the randomized trial with and without AlaGln.

From: Functional and Transcriptomic Characterization of Peritoneal Immune-Modulation by Addition of Alanyl-Glutamine to Dialysis Fluid

Canonical Pathway

p-Value

Moleculesa

Hepatic Fibrosis/Hepatic Stellate Cell Activation

4,68E-06

COL5A3↑, CTGF↑, COL6A3↑, CCL2↓, IL1RL1↑, PDGFRA↑, SERPINE1↑, TNF↓, PDGFRB↑

Noradrenaline and Adrenaline Degradation

1,58E-04

MAOB↑, ALDH1A1↑, DHRS9↓, ADH1B↑

Retinoate Biosynthesis I

1,58E-03

ALDH1A1↑, DHRS9↓, BMP2↑

Serotonin Degradation

1,66E-03

MAOB↑, ALDH1A1↑, DHRS9↓, ADH1B↑

Ethanol Degradation II

2,04E-03

ALDH1A1↑, DHRS9↓, ADH1B↑

Human Embryonic Stem Cell Pluripotency

3,02E-03

FZD8↑, IRS1↑, BMP2↑, PDGFRA↑, PDGFRB↑

Axonal Guidance Signaling

3,72E-03

FZD8↑, SEMA6D↑, GLI3↑, SEMA3D↑, ADAMTS1↑, IRS1↑, BMP2↑, NFATC2↑, ADAMTS9↑

PPAR Signaling

3,80E-03

IL1RL1↑, PDGFRA↑, TNF↓, PDGFRB↑

PAK Signaling

5,13E-03

IRS1↑, PDGFRA↑, TNF↓, PDGFRB↑

Role of Osteoblasts, Osteoclasts and Chondrocytes in Rheumatoid Arthritis

5,25E-03

FZD8↑, IL1RL1↑, IRS1↑, BMP2↑, NFATC2↑, TNF↓

Role of Macrophages, Fibroblasts and Endothelial Cells in Rheumatoid Arthritis

5,37E-03

FZD8↑, CCL2↓, IL1RL1↑, IRS1↑, NFATC2↑, TNF↓, FCGR3A/FCGR3B

Differential Regulation of Cytokine Production in Macrophages and T Helper Cells by IL-17A and IL-17F

6,61E-03

CCL2↓, TNF↓

MSP-RON Signaling Pathway

7,59E-03

CCL2↓, IRS1↑, TNF↓

NF-κB Signaling

7,94E-03

IRS1↑, BMP2↑, PDGFRA↑, TNF↓, PDGFRB↑

3-phosphoinositide Biosynthesis

9,12E-03

PTPN13↑, IRS1↑, PDGFRA↑, CILP↑, PDGFRB↑

Dendritic Cell Maturation

9,77E-03

COL5A3↑, DDR2↑, IRS1↑, TNF↓, FCGR3A/FCGR3B

PXR/RXR Activation

1,00E-02

ALDH1A1↑, IGFBP1↑, TNF↓

Differential Regulation of Cytokine Production in Intestinal Epithelial Cells by IL-17A and IL-17F

1,07E-02

CCL2↓, TNF↓

Putrescine Degradation III

1,07E-02

MAOB↑, ALDH1A1↑

Atherosclerosis Signaling

1,12E-02

ALOX15↑, COL5A3↑, CCL2↓, TNF↓

IL-6 Signaling

1,12E-02

TNFAIP6↑, IL1RL1↑, IRS1↑, TNF↓

Tryptophan Degradation X (Mammalian, via Tryptamine)

1,26E-02

MAOB↑, ALDH1A1↑

HMGB1 Signaling

1,32E-02

CCL2↓, IRS1↑, SERPINE1↑, TNF↓

Basal Cell Carcinoma Signaling

1,32E-02

FZD8↑, GLI3↑, BMP2↑

TREM1 Signaling

1,48E-02

CCL2↓, IL1RL1↑, TNF↓

VDR/RXR Activation

1,62E-02

WT1↑, IL1RL1↑, IGFBP1↑

Superpathway of Inositol Phosphate Compounds

1,95E-02

PTPN13↑, IRS1↑, PDGFRA↑, CILP↑, PDGFRB↑

Glioblastoma Multiforme Signaling

2,34E-02

FZD8↑, IRS1↑, PDGFRA↑, PDGFRB↑

PDGF Signaling

2,40E-02

IRS1↑, PDGFRA↑, PDGFRB↑

Dopamine Degradation

2,40E-02

MAOB↑, ALDH1A1↑

Gαq Signaling

2,40E-02

IRS1↑, RGS16↑, RGS4↑, NFATC2↑

Granulocyte Adhesion and Diapedesis

3,31E-02

CCL2↓, JAM3↑, IL1RL1↑, TNF↓

Role of Hypercytokinemia/hyperchemokinemia in the Pathogenesis of Influenza

3,47E-02

CCL2↓, TNF↓

IGF-1 Signaling

3,63E-02

CTGF↑, IRS1↑, IGFBP1↑

IL-9 Signaling

3,80E-02

IRS1↑, TNF↓

G-Protein Coupled Receptor Signaling

3,80E-02

PTGER3↑, IRS1↑, RGS16↑, RGS4↑, PDE4D↑

Glioma Signaling

3,98E-02

IRS1↑, PDGFRA↑, PDGFRB↑

p53 Signaling

4,07E-02

WT1↑, THBS1↑, IRS1↑

Agranulocyte Adhesion and Diapedesis

4,07E-02

CCL2↓, JAM3↑, CD34↑, TNF↓

Regulation of the Epithelial-Mesenchymal Transition Pathway

4,07E-02

FZD8↑, IRS1↑, JAG1↑, PDGFRB↑

Glucocorticoid Receptor Signaling

4,68E-02

CCL2↓, IRS1↑, NFATC2↑, SERPINE1↑, TNF↓

Renin-Angiotensin Signaling

4,90E-02

CCL2↓, IRS1↑, TNF↓

Docosahexaenoic Acid (DHA) Signaling

4,90E-02

ALOX15↑, IRS1↑

LXR/RXR Activation

5,01E-02

CCL2↓, IL1RL1↑, TNF↓

  1. Analysis of PD effluent cells of the 4 h PET time point. aComparison control without AlaGln versus 8 mM AlaGln in PDF. ↑ up regulated molecules, ↓ down regulated molecules