Table 1 Allergenic protein families identified in feverfew pollen by proteomics.
From: Proteomic profiling of the weed feverfew, a neglected pollen allergen source
Identified allergenic protein families by (LC-MS/MS and 2-DE-LC-MS/MS) | |||
|---|---|---|---|
Allergenic protein family | LC-MS/MS | 2D-LC-MS/MS | Spot # |
60S acidic ribosomal protein | gi|729348440 | gi|802562610 | 27 |
Aldehyde dehydrogenase | gi|8163730 | gi|238846406 | 38 |
Aspartic peptidase (Peptidase A1 family) | gi|976909721 | gi|976909721 | 10 |
Bet v 1 family | gi|976909362 | gi|167472849 | 3 |
Beta-1.3-glucanase (Glycosyl hydrolase 17 family) | gi|976496731 | gi|976928968 | 30 |
Calreticulin | gi|976913141 | gi|976913141 | 9 |
Cupin family (Germin-like protein family) | gi|976899679 | gi|976927409 | 18 |
Cu-Zn superoxide dismutase | gi|976902802 | gi|3914999 | 48 |
Cyclophilin | gi|488726160 | gi|332806715 | 2 |
Cysteine protease | gi|1706276 | gi|28804503 | 11 |
Cytochrome c family | gi|118012 | gi|976899814 | 17 |
Defensin-like protein | gi|817033923 | gi|817033923 | 1 |
Enolase | gi|3023685 | gi|976924044 | 30 |
Glyceraldehyde-3-phosphate dehydrogenase | gi|752855788 | gi|902550458 | 33 |
Heat shock protein 70 | gi|698946330 | gi|976917633 | 9 |
LDH/MDH superfamily | gi|976916739 | gi|976905497 | 32 |
NAC-alpha family | gi|729420144 | gi|976923178 | 6 |
Pathogenesis-related protein PR-1 | gi|743838314 | gi|976917157 | 51 |
Pectate lyase | gi|113476 | gi|302127818 | 39 |
Thaumatin-like protein | gi|20385169 | gi|20385169 | 1 |
Thioredoxin | gi|720041636 | gi|976899454 | 36 |
Triosephosphate-isomerase | gi|976918965 | gi|976923382 | 1 |
Tubulin family | gi|803378277 | gi|902550499 | 49 |
Chitinase | gi|425886502 | n.i. | — |
Chlorophyll a-b binding protein | gi|146403796 | n.i. | — |
Cobalamin-independent methionine synthase | gi|976902600 | n.i. | — |
Flavodoxin | gi|720077294 | n.i. | — |
Glutathione S-transferase | gi|698502214 | n.i. | — |
GMC oxidoreductase | gi|659069842 | n.i. | — |
Heat shock protein 90 | gi|702435110 | n.i. | — |
Iron/manganese superoxide dismutase | gi|15551753 | n.i. | — |
Isoflavone reductase | gi|923534270 | n.i. | — |
L3 Ribosomal protein | gi|901818290 | n.i. | — |
Lipid transfer protein | gi|118490068 | n.i. | — |
Pectin methylesterase | gi|976571059 | n.i. | — |
Peroxiredoxin | gi|823226051 | n.i. | — |
Polcalcin | gi|976896497 | n.i. | — |
Polygalacturonase (Glycosyl hydrolase 28 family) | gi|976926788 | n.i. | — |
Profilin | gi|62249502 | n.i. | — |
Protein kinase | gi|976914952 | n.i. | — |
Pyrophosphatase | gi|901817400 | n.i. | — |
Serine protease (Peptidase S8 family) | gi|976923421 | n.i. | — |
Alcohol dehydrogenase | n.i. | gi|970021885 | 39 |
Beta-xylosidase | n.i. | gi|85813770 | 30 |
Endochitinase (Hevein like-domain) | n.i. | gi|848864792 | 9 |
Serine carboxypeptidase (Peptidase S10 family) | n.i. | gi|976807531 | 11 |
Xyloglucan endotransglucosylase (Glycosyl hydrolases family 16) | n.i. | gi|82394883 | 9 |