Table 1 Putative TREs and primers for generating the firefly luciferase reporters.

From: Genome-wide identification of thyroid hormone receptor targets in the remodeling intestine during Xenopus tropicalis metamorphosis

Gene

Putative TRE

Primers (TRE sequences in bold)

MBD3

GGGTCAGATGGGGACA

TRE-F: 5′-CTAAGGGGTCAGATGGGGACACCCGCGGGATTATTTATTTTATTC-3′ TRE-R: 5′-GCGGGTGTCCCCATCTGACCCCTTAGCCTGAAGTCTGAGG-3′

PPM1B

AGGTCATTTGAGGCCG

TRE-F: 5′-CTAAGAGGTCATTTGAGGCCGCCCGCGGGATTATTTATTTTATTC-3′ TRE-R: 5′-GCGGGCGGCCTCAAATGACCTCTTAGCCTGAAGTCTGAGG-3′

PGPEP1

GGTGCATGTCAGGACA

TRE-F: 5′-CTAAGGGTGCATGTCAGGACACCCGCGGGATTATTTATTTTATTC-3′ TRE-R: 5′-GCGGGTGTCCTGACATGCACCCTTAGCCTGAAGTCTGAGG-3′

JUNB

GGGTAATGTAGGGTCA

TRE-F: 5′-CTAAGGGGTAATGTAGGGTCACCCGCGGGATTATTTATTTTATTC-3′ TRE-R: 5′-GCGGGTGACCCTACATTACCCCTTAGCCTGAAGTCTGAGG-3′

BEND7

AGTTCAGGGCAGGTCA

TRE-F: 5′-CTAAGAGTTCAGGGCAGGTCACCCGCGGGATTATTTATTTTATTC-3′ TRE-R: 5′-GCGGGTGACCTGCCCTGAACTCTTAGCCTGAAGTCTGAGG-3′