Figure 2

Phylogenetically resolved heat map of OTU occurrence and beta diversity across sampling sites. The relative abundance of OTUs representing >0.5% of the archaeal community is shown as a gradient from black (high abundance) to white (low abundance). A comparison of phylogenetic diversity for each sampling site is represented as a weighted UniFrac UPGMA dendogram of jackknifed phylogenetic resampling of the rarified OTU table, and demonstrates the major clustering patterns among hot springs from varying hydrothermal regions. OTU relationships are presented as a neighbor-joining tree with justified branch lengths in which branches from the same phylum are the same color corresponding to the legend. For clarity, the first letter of each phylum is placed at its respective node (B = Bathyarchaeota; A = Aigarchaeota; T = Thaumarchaeota; C = Crenarchaeota; V = Verstraetearchaeota; K/E = Korarchaeota/Euryarchaeota). Following the sample IDs, the designations “TC”, “MC”, and “BC” stand for “top core”, “middle core”, and “bottom core”, respectively. NB: The paraphyletic groupings of Crenarchaeota and Verstraetearchaeota are resolved in the full phylogenetic tree that includes long fragment reference sequences (Supplementary Figure S1).