Table 1 Significant variations in bacterial genera along the toposequence of Montiers.

From: Taxonomic and functional shifts in the beech rhizosphere microbiome across a natural soil toposequence

Phylum	Genus	Bulk Soil				Rhizosphere
Phylum	Genus	Calcaric	Eutric	Hyperdystric	p	Calcaric	Eutric	Hyperdystric	p
Actinobacteria	Lamia	1.80^a ± 0.10	0.73^b ± 0.22	0.45^b ± 0.13	***	1.83^A ± 0.11	1.08^B ± 0.11	0.84^B ± 0.14	***
	Acidothermus	1.39^a ± 0.15	0.01^b ± 0.01	0.00^b ± 0.00	***	1.44^A ± 0.41	0.03^B ± 0.02	0.00^B ± 0.00	**
	Actinospica	0.00 ± 0.00	0.13 ± 0.08	0.12 ± 0.07	0.305	0.02^B ± 0.01	3.18^B ± 0.32	7.84^A ± 2.26	**
	Mycobacterium	1.94^a ± 0.31	1.42^ab ± 0.50	0.41^b ± 0.24	*	3.58^AB ± 1.11	5.10^A ± 0.87	1.70^B ± 0.17	*
	Nocardioides	0.69^a ± 0.16	0.05^b ± 0.02	0.01^b ± 0.01	***	1.48^A ± 0.35	0.11^B ± 0.04	0.02^B ± 0.01	**
	Strepacidiphilus	0.00^a ± 0.00	0.06^a ± 0.02	0.06^a ± 0.03	0.09	0.01 ± 0.01	2.37 ± 0.33	5.84 ± 2.96	0.10
	Streptomyces	0.20^a ± 0.07	0.06^ab ± 0.03	0.02^b ± 0.01	*	1.32^A ± 0.28	0.47^B ± 0.19	0.22^B ± 0.13	*
	Conexibacter	4.65^a ± 0.50	1.56^b ± 0.52	0.45^b ± 0.19	***	4.86^A ± 1.18	2.28^AB ± 0.52	0.57^B ± 0.10	**
Gemmatimonadetes	Gemmatimonas	1.21^a ± 0.09	0.76^ab ± 0.18	0.42^b ± 0.13	**	0.89^A ± 0.16	0.39^B ± 0.05	0.25^B ± 0.07	**
Nitrospira	Nitrospira	2.30^a ± 0.18	0.54^b ± 0.19	0.84^b ± 0.11	***	1.08^A ± 0.15	0.13^B ± 0.03	0.33^B ± 0.05	***
Proteobacteria	Bradyrhizobium	0.98^ab ± 0.05	1.57^a ± 0.22	0.72^b ± 0.14	*	1.59^B ± 0.29	3.35^A ± 0.45	2.16^AB ± 0.48	*
	Pedomicrobium	1.02^a ± 0.07	0.02^b ± 0.01	0.03^b ± 0.01	***	0.74^A ± 0.10	0.04^B ± 0.02	0.02^B ± 0.01	***
	Rhodoplanes	2.15^a ± 0.11	0.37^b ± 0.08	0.09^b ± 0.03	***	2.21^A ± 0.27	0.62^B ± 0.07	0.18^B ± 0.06	***
	Burkholderia	0.01^b ± 0.00	0.12^a ± 0.03	0.15^a ± 0.03	*	0.03^B ± 0.01	0.81^A ± 0.16	1.05^A ± 0.25	**

All the data presented correspond to the mean relative abundance (±Standard Error of the Mean) of four independent replicates collected along the toposequence of Montiers. Only the genera accounting for more than 1% of total reads and varying significantly have been presented. For each genus, significant differences are presented by different letters (a b c for the bulk soil comparison; A B C for the rhizosphere comparison; ANOVA, P < 0.05). The asterisks correspond to the range of p value (‘*’ means the p-value < 0.05, ‘**’ means the p-value < 0.01, ‘***’ means the p-value < 0.001).

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Table 1 Significant variations in bacterial genera along the toposequence of Montiers.

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