Table 2 Summary of canonical signal transduction pathways.

From: Transcriptome-based network analysis reveals renal cell type-specific dysregulation of hypoxia-associated transcripts

Canonical pathway

Pathway id

AB81_exclusive network

HK2_exclusive network

Intersection AB81_HK2

p-value

Adj p-value

p-value

Adj p-value

p-value

Adj p-value

Alk in cardiac myocytes

BioCarta:alkpathway

1.73E-04

0.00E+00

4.23E-04

1.00E-03

  

BMP2 signaling pathway(through Smad)

INOH:BMP2_signaling_TGF-beta_MV

8.70E-03

8.00E-03

2.17E-04

0.00E+00

  

Circadian rhythm pathway

NCI-nature:circadianpathway

    

2.30E-03

2.00E-03

HIF-1-alpha transcription factor network

NCI-nature:hif1_tfpathway

8.80E-05

0.00E+00

  

6.26E-04

0.00E+00

HIF-2-alpha transcription factor network

NCI-nature:hif2pathway

1.79E-03

2.00E-03

1.80E-03

2.00E-03

1.77E-04

0.00E+00

Hypoxic and oxygen homeostasis regulation of HIF-1-alpha

NCI-nature:hif1apathway

  

6.12E-03

1.00E-02

3.21E-03

3.00E-03

ID

CellMap:ID

  

3.40E-04

0.00E+00

7.95E-03

6.00E-03

Mets affect on macrophage differentiation

BioCarta:etspathway

    

2.73E-03

2.00E-03

Angiopoietin receptor Tie2-mediated signaling

NCI-nature:angiopoietinreceptor_pathway

1.02E-03

2.00E-03

    

Estrogen responsive protein efp controls cell cycle and breast tumors growth

BioCarta:efppathway

2.33E-03

0.00E+00

    

nfkb activation by nontypeable hemophilus influenzae

BioCarta:nthipathway

2.08E-03

3.00E-03

    

NOTCH

CellMap:NOTCH

1.84E-03

3.00E-03

    

AP-1 transcription factor network

NCI-nature:ap1_pathway

  

9.35E-06

0.00E+00

  

EGFR1

CellMap:EGFR1

  

5.30E-03

1.00E-03

  

Mapkinase signaling pathway

BioCarta:mapkpathway

  

4.92E-03

5.00E-03

  

Overview of telomerase protein component gene htert transcriptional regulation

BioCarta:tertpathway

  

5.37E-03

7.00E-03

  

Regulation of retinoblastoma protein

NCI-nature:rb_1pathway

  

3.57E-03

4.00E-03

  

Signaling mediated by p38-alpha and p38-beta

NCI-nature:p38alphabeta-downstreampathway

  

1.00E-04

0.00E+00

  
  1. Adjusted p-value: corresponds to a p-value that is estimated from the results of 1,000 simulated null hypothesis queries65.