Table 1 The topological parameters of the PPI datasets. N is the number of nodes, E is the total edge count, δ the network density defined as \(E/(\begin{array}{c}N\\ 2\end{array})\), d avg is average degree and CC is the clustering coefficient. Krog_Cr and Krog_Ex are the Krogan Core and Krogan Extended data sets respectively.
From: Identifying protein complexes in PPI network using non-cooperative sequential game
Dataset | N | E | δ | davg | CC |
|---|---|---|---|---|---|
DIP | 4667 | 21619 | 0.002 | 9.203 | 0.049 |
MIPS | 3950 | 11119 | 0.001 | 5.529 | 0.093 |
Gavin | 1465 | 7672 | 0.007 | 10.474 | 0.531 |
Krog_Cr | 2708 | 7122 | 0.002 | 5.260 | 0.188 |
Krog_Ex | 3674 | 14342 | 0.002 | 7.807 | 0.120 |