Table 1 Transcriptome support for metabolic activity predicted by models.

From: Metabolic Reconstruction and Modeling Microbial Electrosynthesis

Species

Description

Active reactions^

Supported reactions*

Expressed genes

Acetobacterium

CO2 fixation to acetate

338/1244

258/338

402/954

Sulfurospirillum

Reduction of CO2

328/1143

219/328

252/661

Sulfurospirillum

Oxidation of acetate

330/1142

218/330

252/661

Desulfovibrio

Conversion of CO2 to formate

322/1124

244/322

425/759

Desulfovibrio

Consumption of acetate

320/1124

243/320

425/759

  1. ^Active reactions only include reactions with associated genes (gapfilled reactions filtered out). *Supported reactions are active reactions (gapfilled reactions filtered out) associated with at least one actively expressed gene.
Back to article page