Figure 3 | Scientific Reports

Figure 3

From: Genome-wide comparative analyses of correlated and uncorrelated phenotypes identify major pleiotropic variants in dairy cattle

Figure 3

Summary of multi-trait meta-analysis of 25 raw traits (RTs) in the discovery population (dairy bulls). (a) Manhattan plot using SNPs with multi-trait meta-analysis p m < 0.05. The horizontal blue line was p m<= 1 × 10−5. Some reported loci affecting milk traits were highlighted. Equivalent Manhattan plots of principal components (PCs) and Cholesky transformed traits (CTs) were shown in Supplementary Figure S3. (b) Venn gram showing the overlap of numbers of significant (p m < 1 × 10−5) SNPs from multi-trait meta-analysis of RTs, PCs and CTs in the discovery population.

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