Table 1 Sample information stratified by PAM50 subtype.

From: Deconvolution of DNA methylation identifies differentially methylated gene regions on 1p36 across breast cancer subtypes

 

Basal-like

Her2

Luminal A

Luminal B

Total with Assignment

Normal-adjacent

Validation

TCGA tumors

86

31

279

127

523

124

186

Age, mean (SD)

56.8 (12.8)

60 (12.8)

58 (13.5)

57.1 (12.6)

57.8 (13.1)

57.6 (12.7)

Unknown

Stage*, n (%)

—

—

—

—

—

—

—

Early (I/II)

70 (81%)

20 (65%)

207 (74%)

84 (66%)

381 (73%)

NA

Unknown

Late (III/IV)

14 (16%)

10 (32%)

69 (25%)

42 (33%)

135 (26%)

NA

Unknown

Missing

2 (2%)

1 (3%)

3 (1%)

1 (1%)

7 (1%)

NA

Unknown

  1. *AJCC characterized stage, provided by TCGA.