Table 2 Summary of putative SSRs identified in soybean CWDE.

From: Systems Identification and Characterization of Cell Wall Reassembly and Degradation Related Genes in Glycine max (L.) Merill, a Bioenergy Legume

Parameter

Details

Total number of sequences examined

505

Total size of examined sequences (bp)

1981887

Total number of identified SSRs

687

Number of SSR containing sequences

316

Number of sequences containing more than 1 SSR

316

Distribution of different repeat type classes

 

Dinucleotide repeats

189

Trinucleotide repeats

165

Tetranucleotide repeats

230

Pentanucleotide repeats

74

Hexanucleotide repeats

29

Number of Sequences with successful primer pairs

319

Number of sequences without primer pair picked

31

Total primer pairs picked

695