Table 1 Summary statistics of CR sequences in Vietnam carried out on six Vietnamese locations. All the computations were undertaken on the common sequence segment that ranges from 16024 to 574. Main regions represent the following populations: North = Lao Cai + Cao Bang + Ha Noi + Hai Pong, Center = Da Nang, and South = Ho Chi Minh.

From: Phylogeographic and genome-wide investigations of Vietnam ethnic groups reveal signatures of complex historical demographic movements

Population

n

k

k/n

S

nmut

H ± SE

Π ± SE

M

Provinces

 Cao Bang

113

108

0.96

147

151

0.999 ± 0.001

0.0103 ± 0.0004

11.5

 Hai Pong

133

119

0.89

150

156

0.997 ± 0.001

0.0105 ± 0.0003

11.7

 Ha Noi City

38

38

1.00

89

91

1.000 ± 0.006

0.0110 ± 0.0005

12.3

 Lao Cai

115

65

0.57

88

91

0.980 ± 0.005

0.0089 ± 0.0003

9.9

 Da Nang

135

123

0.91

148

153

0.998 ± 0.001

0.0102 ± 0.0002

11.4

 Ho Chi Minh

88

83

0.94

133

137

0.998 ± 0.002

0.0109 ± 0.0004

12.1

Main regions

 North

399

309

0.77

216

230

0.997 ± 0.001

0.0104 ± 0.0002

11.6

 Center

135

123

0.91

148

153

0.998 ± 0.001

0.0102 ± 0.0002

11.4

 South

88

83

0.94

133

137

0.998 ± 0.002

0.0109 ± 0.0004

12.1

Ethnic group

 Hoa

23

23

1

70

71

1.000 ± 0.013

0.0107 ± 0.0007

12.0

 Kho Me

1

 Kinh

399

334

0.84

218

230

0.998 ± 0.000

0.0105 ± 0.0002

11.7

 Mong

115

65

0.57

88

91

0.980 ± 0.005

0.0089 ± 0.0003

9.9

 Nung

21

21

1

54

54

1.000 ± 0.015

0.0094 ± 0.0006

10.5

 Tay

62

54

0.87

114

118

0.998 ± 0.003

0.0110 ± 0.0005

12.2

 Thai

1

Vietnam (all)

622

478

0.77

252

271

0.998 ± 0.000

0.0105 ± 0.0001

11.7

  1. n = Sample size; k = Number of different haplotypes; S = number of polymorphic (segregating sites); n mut = total number of mutations; H = haplotype diversity and standard error; π = nucleotide diversity and standard error; M = average number of nucleotide differences.