Table 1 Features of Ophiocordyceps draft genomes.

Fold coverage

130

29

135

20

19

Scaffolds in assembly

2537

2206

594

2297

3401

Total assembly length (Mbp)

23.92

21.91

23.32

22.19

32.31

N50 (kb)

27

22

112

17

17

Largest scaffold (kb)

167

147

428

118

139

Assembly GC content (%)

55.92

56.1

53.13

53.48

60.35

Transcript GC content (%)

59.84

60.57

56.74

56.98

64.43

Assembly gaps (%)

0.75

0.01

0.4

0.55

0.38

Repetitive content (%)

6.83

6.59

2.87

2.45

4.06

Genes

8629

7621

8174

7995

11275

Gene length (median)

1294

1350

1363

1313

1039

Transcript length (median)

1152

1200

1227

1182

900

Exon length (median)

220

273

268

290

266

CDS length (median)

1149

1200

1227

1182

900

Protein length (median)

383

400

409

394

300

Spliced genes (total, %)

6871 (79.63%)

5777 (75.8%)

6258 (76.56%)

5952 (74.45%)

7705 (68.34%)

Exons per gene (median)

3

2

2

2

2

Intron length (median)

62

60

64

65

71

Introns per spliced gene (median)

2

2

2

2

2

Gene density (genes/Mbp)

360.69

347.89

350.45

360.3

348.92

Unique PFAM domains

3499

3396

3542

3482

3446

Genes with PFAM (total, %)

5749 (66.62%)

5359 (70.32%)

5949 (72.78%)

5746 (71.87%)

6379 (56.58%)

Genes with GO (total, %)

3981 (46.14%)

3765 (49.4%)

4143 (50.69%)

4000 (50.03%)

4387 (38.91%)

Genes with signalP (total, %)

914 (10.59%)

840 (11.02%)

802 (9.81%)

681 (8.52%)

1064 (9.44%)

Genes with TMHMM (total, %)

1536 (17.8%)

1391 (18.25%)

1537 (18.8%)

1469 (18.37%)

1752 (15.54%)

CEGMA completeness (%)

99.13

98.69

99.13

98.25

98.47

BUSCO complete or fragmented (%)

97.6

93.6

98.2

95.9

89.6