Table 1 Spectral and Kinetic Constants of Truncation and Point Mutants of Arabidopsis PhyB.

From: Photosensing and Thermosensing by Phytochrome B Require Both Proximal and Distal Allosteric Features within the Dimeric Photoreceptor

Mutationa

Absorption maximab (nm)

Photoconversion ratec,d,e (min−1)

Therm revc,d,f (x1000 min−1)

Pr

Pfr

Pr  Pfr

Pfr  Pr

Pfr  Pr

Domain Truncations

PΦB

1–450

658

707

0.72g

0.11 (±0.02)

10.5 (±0.1)

1–624

664

724

0.98 (±0.03)

2.45 (±0.04)

7.91 (±0.02)

1–908h

665

724

k1 2.1 (±0.3)

2.6 (±0.2)

320 (±20)

k2 0.47 (±0.05)

 

34 (±3)

FLh,i

664

725

k1 1.1

 

410

k2 0.12

 

40

PCB

1–450

643

693

1.04 (±0.05)

0.38 (±0.02)

38.4 ( ± 0.1)

1–624

651

714

1.35 (±0.04)

3.52 (±0.03)

0.52 (±0.01)

1–908

651

714

1.20 (±0.08)

3.52 (±0.06)

29.9 (±0.3)

NTE Truncations

10–624

665

724

0.86 (±0.04)

2.43 (±0.01)

9.54 (±0.02)

20–624

665

724

0.82 (±0.09)

2.52 (±0.05)

10.1 (±0.1)

30–624

665

724

0.84 (±0.03)

2.54 (±0.07)

7.7 (±0.5)

41–624

665

725

0.88 (±0.03)

2.60 (±0.06)

6.50 (±0.02)

46–624

666

725

10.8 (±0.1)

  

51–624

664

723

1.1 (±0.1)

2.53 (±0.06)

16.2 (±0.1)

55–624

665

724

  

14.9 (±0.1)

56–624

665

723

  

32.3 (±0.1)

57–624

665

722

0.97 (±0.05)

2.35 (±0.09)

50.1 (±0.1)

59–624

664

719

  

91.8 (±0.3)

60–624

665

720

1.09 (±0.02)

2.39 (±0.06)

85 (±1)

65–624

666

717

1.18 (±0.09)

 

143 (±1)

70–624

665

717

1.05 (±0.06)

2.28 (±0.03)

146 (±1)

80–624

664

717

1.17 (±0.03)

2.3 (±0.1)

169 (±1)

90–624

664

717

1.3g

2.5g

163 (±1)

100–624

664

717

0.99 (±0.05)

2.2 (±0.2)

134 (±1)

PSM Point Mutants

S55A,K56A

666

725

  

16.3 (±0.1)

Q59A,Q60A

666

721

  

35.5 (±0.1)

Y61A,T62A

665

725

  

7.53 (±0.01)

  1. aData were collected from PhyB containing the indicated residues after removal of the N-terminal 6His-TEV tag.
  2. bMaxima of the Q absorption band. Pfr maxima were identified from difference spectra generated by subtracting red-irradiated from dark-adapted samples.
  3. cCalculated from the global fit of absorption at 640 nm, 650 nm, 660 nm, 670 nm, 700 nm, 710 nm, 720 nm, 730 nm, and 740 nm as a function of time using the equation: Abs = ΔAbstotal•exp(−k•Time) + Absinitial.
  4. dValues in parentheses represent the average of three technical replicates (±SD).
  5. eFluence rate was calibrated to 12 μmol•m−2•s−1 at the intersecting spectrophotometric light path.
  6. fFluence rate was calibrated to a nominal 0.465 μmol•m−2•s−1 for each measurement.
  7. gAverage of two technical replicates.
  8. hPr  Pfr photoconversion, Pfr  Pr photoconversion, and/or thermal reversion were expressed as the sum of two exponentials using the equation: Abs = ΔAbstotal1•exp(−k1*Time) + ΔAbstotal2•exp(−k2•Time) + Absinitial.
  9. iData were collected from a single sample.