Table 3 Allelic profile of S. pneumoniae originating from chimpanzee lung tissue compared to closely related human isolates from the MLST data base.
Isolate/DNA sample (country of origin) | Allel number for gene fragment | ST | Serotype | ||||||
|---|---|---|---|---|---|---|---|---|---|
aroE | gdh | gki | recP | spi | xpt | ddl | |||
IMT113/115 (TNP, Côte d’Ivoire) | 7 | 11 | 4 | 1 | 6 | 112 | 8 | 8485* | 19 A |
107 isolates (Kenia and Gambia) | 7 | 11 | 4 | 1 | 6 | 112 | 14 | 847 | 19 A |
PVT0032 (Gambia) | 7 | 11 | 4 | 1 | 6 | 112 | 15 | 3326 | 19 A |
LWC infant (LWC, Cameroon) | 177 | 134 | 4 | 18 | 9 | 83 | 18 | 8949 | n.d. |
KSA08 (Chad) | 177 | 134 | 4 | 18 | 9 | 83 | 18 | 8949 | 9 V |
