Table 4 Gene ontology analysis of genes more highly expressed in Short Tail Han sheep using the EnrichR program. (p < 0.001).

From: A comparison of transcriptomic patterns measured in the skin of Chinese fine and coarse wool sheep breeds

Gene Ontology Term

p-Value

Gene Ontology Classification

Genes

muscle system process (GO:0003012)

2.63E-07

Biological process

DTNA; CCDC78; ROCK1; ROCK2; TPM2; TPM1; PIK3C2A; ADRA1A; ACTG2; ACTA1; PLN; DES; PIK3CA; SLMAP; SCN7A; DMD; MYH11

regulation of DNA metabolic process (GO:0051052)

0.000941

Biological process

DNAJC2; CCDC88A; KITLG; RAD50; STAG2; PIK3CA; ESCO1; ATRX; UBE2V2; NBN; PDS5A; SMC3

contractile fibre (GO:0044449)

2.1E-07

Cellular component

SYNPO2; TPM2; TPM1; NEXN; NEB; ADRA1A; SYNE2; SYNE1; ACTA1; DES; CFL2; MYH11; DMD; PGM5; SCN1A

centrosome (GO:0005813)

3.47E-05

Cellular component

IQCB1; PPP1R12A; ROCK2; CEP350; CEP120; IFT74; MPHOSPH9; NIN; ODF2L; KIF3A; AKAP9; SASS6; CEP162; PKN2; KIF20B; CEP290; PIBF1; LRRCC1

cornified envelope (GO:0001533)

7.1E-05

Cellular component

SCEL; CNFN; RPTN; IVL; HRNR

microtubule organizing (GO:0044450)

0.000441

Cellular component

NIN; MPHOSPH9; CCDC78; AKAP9; SASS6; CEP162; CEP83; CEP290

nucleolus (GO:0005730)

0.000657

Cellular component

ZNF175; RIF1; CEBPE; ANKRD12; PTEN; PSIP1; PHAX; PDS5A; SMC3; HIF1A; SMC4; SYNE1; SENP6; SGOL2; GOLGA4; HSPH1; DNAJB4; CWC22; NBN; RAB11FIP2; ZC3H15; LRRCC1; IQCB1; DIS3; ZNF260; CEP350; ATRX; DNTTIP2; LARP7; PRPF40A; THAP2; UGDH; PM20D2; RAD50; NIN; CREB1; STAG2; ZNF638; PKN2; PPIG; KIF20B; BDP1; CLOCK; BIRC3

structural constituent of muscle (GO:0008307)

6.09E-07

Molecular function

PDLIM3; MYBPC2; TPM2; TPM1; NEXN; MYH11; DMD; NEB