Table 1 Relevant whole genome sequencing information of six XDR isolates characterized in this study.
Characteristics | E. coli (EPEC) | S. flexneri | P. aeruginosa | S. Typhimurium | K. pneumoniae | P. stuartii |
|---|---|---|---|---|---|---|
Strain ID | MV292587 | IDH07210 | MV36846 | MV32691 | MV36808 | MV493 |
Sequence size (Mb) | 430 | 207 | 303 | 363 | 390 | 429 |
No. of reads | 592054 | 428839 | 490091 | 563297 | 553858 | 586289 |
Avg. read lengths (bp) | 727 | 483 | 620 | 646 | 704 | 732 |
No. of scaffolds | 61 | 307 | 65 | 29 | 93 | 76 |
GC content (%) | 50.5 | 50.5 | 66.3 | 52.2 | 56.6 | 41.0 |
Mean seq. size | 48264.3 | 5769.2 | 56033.5 | 68477.5 | 33376.8 | 62370.5 |
Longest scaffold size (bp) | 541956 | 75239 | 591202 | 667925 | 365674 | 278521 |
Total number of ORF | 5429 | 4664 | 6117 | 4817 | 5767 | 4597 |
ORFs encode Virulence, toxin and AMR | 128 | 116 | 145 | 121 | 136 | 29 |
Phage, Tn, plasmids | 150 | 42 | 8 | 25 | 113 | 41 |
