Table 2 Descriptions and GO term classification of the differentially expressed genes related to immune response for CMC_DLB1-NNV vs CMC_DLB1 comparison.

From: Innate Cell-Mediated Cytotoxic Activity of European Sea Bass Leucocytes Against Nodavirus-Infected Cells: A Functional and RNA-seq Study

Description

Gene ontology terms

CMC_DBL1 vs CTRL

CMC_DBL1-NNV vs CTRL

CMC_DBL1-NNV vs CMC_DBL1

histone h2a-like

response to bacterium, cell killing

not significant

not significant

up

fc receptor-like b-like

type IIa hypersensitivity, type III hypersensitivity, antibody-dependent cellular cytotoxicity, response to bacterium, positive regulation of acute inflammatory response to antigenic stimulus, positive regulation of myeloid leukocyte mediated immunity

not significant

up

up

arachidonate 5-lipoxygenase-activating protein (ALOX5AP)

leukotriene production involved in inflammatory response, arachidonic acid metabolite production involved in inflammatory response

up

up

up

histone partial

response to bacterium, cell killing

not significant

up

up

mucosa associated lymphoid tissue lymphoma translocation gene 1 (MALT1)

B-1 B cell differentiation, positive regulation of NF-kappaB transcription factor activity

up

up

up

neural precursor cell developmentally down-regulated 4 (NEDD4)

cytokine-mediated signaling pathway, immune response, viral process, leukocyte activation, transmission of virus, T cell aggregation, lymphocyte aggregation, dissemination or transmission of symbiont from host, leukocyte cell-cell adhesion

up

not significant

down

integrin alpha-4-like (ITGA4)

leukocyte cell-cell adhesion, immune system process, T cell migration, lymphocyte migration

not significant

down

down

pleckstrin homology domain-containing family a member 1-like (PKHA1)

immune system process, antigen receptor-mediated signaling pathway

up

not significant

down

interferon- double-stranded rna-activated protein kinase-like (PKR)

cytokine production, viral process, immune response, evasion or tolerance by virus of host immune response, regulation of NLRP3 inflammasome complex assembly, regulation of hematopoietic stem cell proliferation, response to interferon-alpha

up

up

down

suppressor of cytokine signaling 6 (SOCS6)

leukocyte cell-cell adhesion, lymphocyte activation, immune system process, T cell aggregation, T cell activation

not significant

down

down

semaphorin-7a-like isoform ×1 (SEMA7A)

immune system process, cytokine production, regulation of macrophage cytokine production

up

not significant

down

bone morphogenetic protein receptor type-2 (BMPR2)

lymphatic endothelial cell differentiation

down

down

down

Poly(ADP-ribose) polymerase family member 14 (PARP14)

T cell aggregation, T cell activation, cytokine production, viral process, regulation of immune response, interleukin-27-mediated signaling pathway, negative regulation of interleukin-6-mediated signaling pathway, regulation of defense response

not significant

not significant

down

receptor-type tyrosine-protein phosphatase c-like (PTPRC)

immune system process, antigen receptor-mediated signaling pathway

not significant

down

down

unconventional myosin-ie (MYO1E)

immune system process

down

down

down

cell adhesion molecule 4-like

immune system process, cytokine production

up

up

down

nucleic acid binding protein

lymphocyte activation, T cell migration, immune system process, T cell aggregation, T cell activation, cytokine production, viral process

up

up

down

protein nlrc3-like

leukocyte cell-cell adhesion, immune system process, T cell migration, lymphocyte migration, T cell activation

up

not significant

down