Table 5 List of 44 ion transporters/channels annotated to polymorphic SNPs in a segregating wheat population developed for salt tolerance.
From: Mapping QTLs conferring salt tolerance and micronutrient concentrations at seedling stage in wheat
SNP ID | IWGSC Sequence Hit | Blast Top Hit Spp. | Annotated Channel/Transporter | Transports |
|---|---|---|---|---|
AX-94778362 | lcl|Traes_4BL_5A58CACB2.1 | T. durum | HKT transporter | K |
AX-95224228 | lcl|Traes_6BS_E420DDD6D.1 | H. vulgare | K+-H+ exchange | K |
AX-94995317 | lcl|Traes_1DS_07F02E427.1 | A. tauschii | K transporter 12 | K |
AX-94388980 | lcl|Traes_5DS_49CF8A4C4.1 | H. vulgare | K (+) efflux antiporter | K |
AX-95215612 | lcl|Traes_XX_D8915FD17.1 | A. tauschii | Voltage-gated K channel | K |
AX-95654644 | lcl|Traes_1BL_611DF0433.1 | H. vulgare | Jacalin-related lectin 3 | K |
AX-94699167 | lcl|Traes_5AL_51E31BF07.1 | T. urartu | Out-rectifying K channel | K |
AX-94484138 | lcl|Traes_3B_81DB429AC.1 | T. urartu | Chloride channel CLC-e | Cl |
AX-94546397 | lcl|Traes_2DL_A591AC867.1 | A. tauschii | Chloride channel CLC-g | Cl |
AX-95126745 | lcl|Traes_4BL_E0ABA8471.1 | A. tauschii | Cation Ca exchanger 4 | Ca |
AX-95069958 | lcl|Traes_1AS_429D67C42.1 | A. tauschii | Ca stress-gated channel 1 | Ca |
AX-94849975 | lcl|Traes_7BL_13D715DB0.1 | T. urartu | Ca homeostasis ER | Ca |
AX-94662401 | lcl|Traes_4BS_06DC8C269.1 | A. tauschii | Ca-transporting ATPase | Ca |
AX-94635693 | lcl|Traes_XX_0593C741B.1 | H. vulgare | Zn transporter 6 | Zn |
AX-94414919 | lcl|Traes_1DS_C2EFEFBB9.1 | T. aestivum | Zn transporter 7 | Zn |
AX-95172326 | lcl|Traes_1DS_D28FA6FF2.1 | A. tauschii | Zn transporter At3g08650 | Zn |
AX-94495517 | lcl|Traes_XX_79F99051D.1 | H. vulgare | Metal tolerance C2 | Zn |
AX-95634832 | lcl|Traes_1AS_0B179C27B.1 | T. urartu | IQM1 | Zn |
AX-94755145 | lcl|Traes_2DL_5C445EE47.1 | H. vulgare | Mg transporter NIPA3 | Mg |
AX-95159756 | lcl|Traes_2AL_065DBAB56.1 | H. vulgare | Mg transporter NIPA4 | Mg |
AX-94692118 | lcl|Traes_2BL_D5156A4A5.1 | H. vulgare | Mg transporter NIPA4 | Mg |
AX-94624155 | lcl|Traes_4AL_7541D0C33.1 | T. urartu | ER membrane body 2-X2 | Mg, Fe |
AX-95142803 | lcl|Traes_2DL_CCAE7B431.1 | A. tauschii | Sulfate transporter | Sulfate |
AX-94518655 | lcl|Traes_3AL_224FB10D3.1 | T. aestivum | Sulfate transporter | Sulfate |
AX-94852973 | lcl|Traes_XX_7D456E213.1 | T. urartu | Nitrate transporter | Nitrate |
AX-94991110 | lcl|Traes_2BL_0E87D8729.1 | A. tauschii | NRT1 PTR FAMILY | Nitrate |
AX-95216700 | lcl|Traes_2BS_88803DFE6.1 | A. tauschii | NRT1 PTR FAMILY | Nitrate |
AX-94863332 | lcl|Traes_3B_91715BB56.1 | A. tauschii | Anion transporter 7 | Anions |
AX-94775993 | lcl|Traes_2BL_007AADDF1.1 | A. tauschii | G-3-Phosphate transporter1 | Anions |
AX-94550729 | lcl|Traes_4BL_32F50466D.1 | T. urartu | Mo-anion transporter | Anions |
AX-94583481 | lcl|Traes_3DS_50B54D1FC.1 | A. tauschii | WPP domain-associated | Cations |
AX-94752371 | lcl|Traes_2DL_51FF05F66.1 | A. tauschii | Cu-transporting HMA5 | Copper |
AX-94936984 | lcl|Traes_7DS_D439AB891.1 | H. vulgare | Pyrophosphate H+ pump | Proton Pump |
AX-94384299 | lcl|Traes_XX_796D903AA.1 | H. vulgare | ATP synthase Mitochon. | Proton |
AX-95118708 | lcl|Traes_7DL_41A6D7A34.1 | A. tauschii | Cytochrome-c oxidase | Proton |
AX-94486290 | lcl|Traes_3AL_06CDB999D.1 | G. hirsutum | ATP synthase Mitochon. | Proton |
AX-94982994 | lcl|Traes_2DL_B4C9A5695.1 | B. distachyon | H+-exporting ATPase | Proton |
AX-94713620 | lcl|Traes_XX_DFFB37624.1 | B. distachyon | Anthranilate BTase 1 | Non-selective |
AX-94909932 | lcl|Traes_5AS_D7A8B1D1B.1 | H. vulgare | Mechanosensitive channel | Ions |
AX-95257567 | lcl|Traes_2DL_C065A5C4A.1 | A. tauschii | Solute carrier 22–15 | Metal ions |
AX-94985111 | lcl|Traes_7AS_705BE4B61.1 | T. urartu | Solute carrier fam 35-F1 | Metal ions |
AX-94757270 | lcl|Traes_1AL_CEA78C84D.1 | T. urartu | S deficiency-induced 1 | S |
AX-94560970 | lcl|Traes_1BL_6741F0C8B.1 | T. urartu | S deficiency-induced 1 | S |
AX-94869513 | lcl|Traes_1DL_36CEA53FD.1 | A. tauschii | S deficiency-induced 1 | S |
