Table 1 Variants and samples in this study.
From: Fine-mapping of genetic loci driving spontaneous clearance of hepatitis C virus infection
European ancestry | African ancestry | |
|---|---|---|
Variants | ||
Initial | 191,357 | 191,357 |
HWE (p-value < 1E–6) | −394 | −300 |
Missingness (5%) | −24,426 | −19,896 |
After QC | 166,537 | 171,161 |
Samples | ||
Initial | 1,416 | 227 |
Missingness (5%) | −24 | −2 |
Heterozygosity | −9 | −1 |
Duplicated | −28 | −6 |
After QC | 527 cases/828 controls | 75 cases/171 controls |
